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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015897211.1_cds_XP_016448084.1_42780
CDS Infomation

[gene=LOC107773149] [db_xref=GeneID:107773149] [protein=sphingoid long-chain bases kinase 2, mitochondrial-like] [protein_id=XP_016448084.1] [location=join(19981..20077,20110..20181,20361..20437,21374..21427,21504..21563,22153..22230,22384..22430,22524..22564,22745..22829,23439..23553,23712..23834,23940..24040,25216..25345)] [gbkey=CDS]
Sequence

ATGATTATATATCAAGGTATAGTAGCAGTTGCAATGGCGAGAAATCCTTCTTTAATCAGA
GCAGAACAGCCTATGGCTTCAGATCTCTCTTCAACCGACTGCACGGCTCTCCGTGGCGGC
GCTTCCCTTCGTCGCCGCCGTGACCTCGTCTTCGTCGTTAATCCCCGAGGAGCTAATGGA
ACAACGGTTCAGCAATGGAAGAAGCTACTTCCTTTCCTTAGGTCTCGCTTTGGTGATGAC
TGTAATATATGCGAATCTTTAACTTCAGGTCCTTCTCATGCCATTGATATAACAAGAGAG
GCTATCCGTGAAGGAGCTGATGCTGTAATTGCAGTGGGCGGTGATGGGACTCTTCATGAG
GTTGTTAATGGCTTCTTCTGCAGTGGAAAACCTGTTTGTAATCATGATATGAACTCCAGC
CATTCAACTGCTCTTGGCATAATCCCTTTAGGTACTGGATCTGACTTTGCCAGGACGCTT
GGCTGGAAAAATGATCCTCATGACGCCATAGAACGCATTGCTAAAGGGCTGAAATCCAAA
ATTGATGTTGGATGCATAACTGGAGAAATTGGAGAATCCCATTACTTCATCAATGTTGCC
GATATTCATCTAAGTGCAAAAGCAGGTTATTATGCCTCAAGGTACAAGAAATTTGGAAAC
TTATGTTATGTTATTGGTGCTTTGCAAGCTTTCTTTCGGCACCACAACCAAGATTTAAGG
ATCAAGGTTGATGAGGGGGACTGGGAAGTATGTTCCCAAGTAACTGCTCTTTGTATTGGG
AATGCAAAATATTTTGGTGGCGGAATGAAGATTACACCAAATGCCAACCCCTCAAGCGGG
GATTATGAGGTGGTCATCCTGCAGGACTTCAAGTGGTATGATTTCATTTTCAAAATGCAT
AAGCTGTACAATGGGACACACTTATCAGTGAAAAATGTATCTTCAAGAAGGGCACGTTCA
ATTGAAGTCGAAGAGATTGGAAGCAATGGCTCGATATATGTTCAGTCTGATGGAGAATTC
TTAGGATTCCTTCCTAGGAAGTTTTCTATACTACCTGGTGTTATTGAACTAATTTGCTAA

Peptide Sequence

PEP ID

XP_016448084.1
PEP Infomation

PREDICTED: sphingoid long-chain bases kinase 2, mitochondrial-like [Nicotiana tabacum]
Sequence

MIIYQGIVAVAMARNPSLIRAEQPMASDLSSTDCTALRGGASLRRRRDLVFVVNPRGANG
TTVQQWKKLLPFLRSRFGDDCNICESLTSGPSHAIDITREAIREGADAVIAVGGDGTLHE
VVNGFFCSGKPVCNHDMNSSHSTALGIIPLGTGSDFARTLGWKNDPHDAIERIAKGLKSK
IDVGCITGEIGESHYFINVADIHLSAKAGYYASRYKKFGNLCYVIGALQAFFRHHNQDLR
IKVDEGDWEVCSQVTALCIGNAKYFGGGMKITPNANPSSGDYEVVILQDFKWYDFIFKMH
KLYNGTHLSVKNVSSRRARSIEVEEIGSNGSIYVQSDGEFLGFLPRKFSILPGVIELIC

Transcript Sequence

Gene sequence data has not been registered.